PPDB

 The Plant Proteome Database

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AT5G60750.1   CAAX amino terminal protease family protein
Lab Annot. SCO4 - CAAX amino terminal protease family
Mapman: 29.5.7.1.1* protein.degradation.metalloprotease.M.M79
Curated Location plastid (Pubmed: 23940253 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G14270.1 11Arabidopsis thaliana1E-1925929420 (0)C
AT1G14270.4 11Arabidopsis thaliana8E-1822830430 (0)_
AT1G14270.3 11Arabidopsis thaliana8E-1822830430 (0)_
Os06g30910.1 7Oryza sativa1E-12131856710 (0)C
Os09g24670.1 7Oryza sativa7E-2124028440 (0)C
Os08g33900.1 7Oryza sativa2E-1924428450 (0)C
v1_GRMZM2G014709_P02 4a53Zea mays7E-11636854661 (1)M
Zm00001eb032160_P002 agpv5Zea mays7E-11636854660 (0)M
Zm00001eb032160_P003 agpv5Zea mays7E-11636854660 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CPBP(2) Trep_Strep(2)
TargetP: Chloroplast (Class 2 C0.934; M0.211; S0.017; _0.004)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 5 TMs
Aramemnon: 5 TMs
TAT position:
Length 347 aa (-cTP 296)
Molecular Weight 39.00 kDA(-cTP 33.63)
PI 9.33(-cTP 8.57)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help