PPDB

The Plant Proteome Database

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AT5G60710.1   Zinc finger (C3HC4-type RING finger) family protein

Lab Annot. Zinc finger (C3HC4-type RING finger) protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G38970.1 11Arabidopsis thaliana072954682 (2)M
AT3G54780.1 11Arabidopsis thaliana071853670 (0)_
AT1G08050.1 11Arabidopsis thaliana068451652 (1)C
Os02g56280.1 7Oryza sativa074455690 (0)_
Os04g42980.1 7Oryza sativa075150650 (0)_
Os02g40664.1 7Oryza sativa074352660 (0)M
Zm00001eb191920_P002 agpv5Zea mays076054680 (0)_
GRMZM2G130002_P01 3.21Zea mays076054680 (0)_
Zm00001eb258330_P002 agpv5Zea mays076153680 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PHD(1) Prok-RING_1(1) TPR_4(1) VWA(1) VWA_2(1) VWA_3(1) VWA_CoxE(1) Vwaint(1) zf
TargetP: Mitochondria (Class 4 C0.129; M0.362; S0.005; _0.069)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 704 aa (-cTP 643)
Molecular Weight 76.42 kDA(-cTP )
PI 9.13(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help