PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G60680.1   transcription initiation factor TFIID subunit (Protein of unknown function%2C DUF584)

Lab Annot. Protein of unknown function, DUF584
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G45210.1 11Arabidopsis thaliana2E-4816358710 (0)M
AT2G28400.1 11Arabidopsis thaliana9E-4316654630 (0)M
AT5G03230.1 11Arabidopsis thaliana6E-3116944590 (0)_
Os04g43990.1 7Oryza sativa7E-2814546580 (0)M
Os10g33990.1 7Oryza sativa1E-167653610 (0)M
Os02g41840.1 7Oryza sativa9E-1514144560 (0)M
Zm00001eb077160_P001 agpv5Zea mays5E-2515143560 (0)M
v1_GRMZM2G079683_P01 4a53Zea mays5E-2515143560 (0)M
GRMZM2G079683_P01 3.21Zea mays5E-2515143560 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PRAS(1) Senescence_reg(1)
TargetP: Mitochondria (Class 5 C0.053; M0.447; S0.005; _0.342)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 163 aa (-cTP 91)
Molecular Weight 18.23 kDA(-cTP )
PI 5.42(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help