PPDB

 The Plant Proteome Database

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AT5G60660.1   plasma membrane intrinsic protein 2%3B4
Lab Annot. PIP2;4/PIP2F (plasma membrane intrinsic protein 2;4); water channel
Mapman: 34.19.1 transport.Major Intrinsic Proteins.PIP
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G37170.2 11Arabidopsis thaliana8E-17528583880 (0)S
AT2G37170.1 11Arabidopsis thaliana6E-174285838836 (36)_
AT2G37180.1 11Arabidopsis thaliana1E-17128583882 (2)_
Os02g41860.2 7Oryza sativa3E-1682957886128 (128)_
Os07g26660.1 7Oryza sativa8E-16429378840 (0)_
Os02g41860.1 7Oryza sativa1E-1632738088128 (128)_
Zm00001eb247760_P001 agpv5Zea mays2E-16829578870 (0)_
v1_GRMZM2G154628_P01 4a53Zea mays2E-168295788743 (43)_
GRMZM2G154628_P01 3.21Zea mays2E-168295788747 (45)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: MIP(1)
TargetP: Cytoplasm (Class 2 C0.021; M0.075; S0.311; _0.949)
Predotar:
Subcel. Location:
TM-HMM prediction: 6 TMs
Aramemnon: 6 TMs
TAT position:
Length 291 aa (-cTP 278)
Molecular Weight 30.95 kDA(-cTP )
PI 8.22(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1345Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 1)
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1449Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 2)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1614Detail       Natural Senescence leaf [A. thaliana]  
1615Detail       Natural Senescence leaf [A. thaliana]  
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
2236Detail       seedlings [A. thaliana] total tissue gfs9
2237Detail       seedlings [A. thaliana] total tissue gfs9
2238Detail       seedlings [A. thaliana] total tissue gfs9
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2255Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9
2270Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to roots)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
20061580(chloroplast envelope (inner+outer))
22060019(phosphoproteome - N-starved seedlings)
21533090(plasmodesmata-crude)
21325567(root-proteome (wt & det3))
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data

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