PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G60590.1   DHBP synthase RibB-like alpha/beta domain-containing protein

Lab Annot. DHBP synthase RibB-like alpha/beta domain
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G60590.3 11Arabidopsis thaliana2E-1161621001000 (0)C
AT5G60590.2 11Arabidopsis thaliana6E-1151621001000 (0)C
Os03g10450.1 7Oryza sativa2E-409370800 (0)M
Os03g10450.2 7Oryza sativa2E-073461790 (0)M
GRMZM2G055217_P01 3.21Zea mays4E-399568781 (1)C
Zm00001eb007760_P001 agpv5Zea mays4E-399568780 (0)C
Zm00001eb007760_P002 agpv5Zea mays4E-399568780 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Sua5_yciO_yrdC(1)
TargetP: Chloroplast (Class 3 C0.755; M0.176; S0.007; _0.116)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 164 aa (-cTP 133) (-lTP 88)
Molecular Weight 17.94 kDA(-cTP 14.61)(-lTP 9.47)
PI 9.13(-cTP 8.59)(-lTP 6.059)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help