PPDB

PPDB	The Plant Proteome Database

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AT5G60530.1 late embryogenesis abundant protein-related / LEA protein-like protein

Lab Annot.

Mapman: 33.2 development.late embryogenesis abundant

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G60520.1 11 Arabidopsis thaliana 5E-159 308 67 81 0 (0) S
AT5G54370.1 11 Arabidopsis thaliana 3E-95 271 49 66 0 (0) S
AT4G27400.1 11 Arabidopsis thaliana 7E-94 282 47 63 0 (0) S
Os01g73700.1 7 Oryza sativa 5E-64 265 40 57 0 (0) S
Os05g47940.1 7 Oryza sativa 2E-63 269 40 55 0 (0) S
Os01g73720.1 7 Oryza sativa 2E-63 254 41 56 0 (0) S
v1_GRMZM2G146502_P01 4a53 Zea mays 2E-62 277 38 54 0 (0) S
Zm00001eb196940_P001 agpv5 Zea mays 2E-62 277 38 54 0 (0) S
GRMZM2G146502_P01 3.21 Zea mays 2E-62 277 38 54 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BORG_CEP(2) CDC27(1) CDC45(1) DUF2151(1) DUF4569(1) Nop14(1) NPR3(1) Presenilin(
TargetP:	Secreted (Class 1 C0.005; M0.071; S0.983; _0.051)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	439 aa (-cTP 416)
Molecular Weight	50.08 kDA(-cTP )
PI	8.87(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
21173025(root proteome)

Comparative Proteomics Data