PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G60450.1   auxin response factor 4

Lab Annot.
Mapman: 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G60450.2 11Arabidopsis thaliana078896960 (0)_
AT2G33860.1 11Arabidopsis thaliana3E-14140054700 (0)_
AT5G62000.1 11Arabidopsis thaliana1E-12842347670 (0)C
Os05g48870.1 7Oryza sativa9E-14071240540 (0)_
Os01g48060.2 7Oryza sativa7E-13771839520 (0)_
Os01g48060.1 7Oryza sativa1E-13572239520 (0)_
GRMZM2G030710_P01 3.21Zea mays9E-14372738520 (0)_
Zm00001eb295830_P002 agpv5Zea mays9E-14372738520 (0)_
v1_GRMZM2G030710_P01 4a53Zea mays9E-14372738523 (3)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AUX_IAA(2) Auxin_resp(1) B3(2) MAGE_N(2)
TargetP: Cytoplasm (Class 4 C0.370; M0.027; S0.006; _0.754)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 788 aa (-cTP 735)
Molecular Weight 87.28 kDA(-cTP )
PI 6.01(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help