PPDB

PPDB	The Plant Proteome Database

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AT5G60250.1 zinc finger (C3HC4-type RING finger) family protein

Lab Annot.

zinc finger (C3HC4-type RING finger) protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G25370.1 11 Arabidopsis thaliana 2E-128 481 45 60 0 (0) M
AT3G45580.1 11 Arabidopsis thaliana 5E-122 359 50 68 0 (0) _
AT5G37560.1 11 Arabidopsis thaliana 8E-119 382 46 65 0 (0) _
Os11g01240.1 7 Oryza sativa 6E-61 390 33 50 0 (0) S
Os12g43560.1 7 Oryza sativa 6E-41 417 29 47 0 (0) _
Os08g35060.1 7 Oryza sativa 2E-35 215 34 49 0 (0) _
Zm00001eb194870_P002 agpv5 Zea mays 2E-90 383 37 58 0 (0) S
GRMZM2G020996_P01 3.21 Zea mays 2E-90 383 37 58 0 (0) S
v1_GRMZM2G020996_P01 4a53 Zea mays 2E-90 383 37 58 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C1_4(2) IBR(4) RVT_3(1) TerY_C(2) zf-C3HC4(3) zf-RING_11(1) zf-RING_2(3) zf-UBP_
TargetP:	Cytoplasm (Class 4 C0.133; M0.224; S0.033; _0.511)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	655 aa (-cTP 588)
Molecular Weight	73.47 kDA(-cTP )
PI	6.38(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data