PPDB

The Plant Proteome Database

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AT5G60130.1   AP2/B3-like transcriptional factor family protein

Lab Annot. transcriptional factor B3 protein
Mapman: 27.3.41 RNA.regulation of transcription.B3 transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G60130.4 11Arabidopsis thaliana03231001000 (0)_
AT5G60130.3 11Arabidopsis thaliana03001001000 (0)_
AT5G60130.2 11Arabidopsis thaliana032692922 (2)_
Os11g09160.1 7Oryza sativa2E-1113730500 (0)_
Os11g09160.2 7Oryza sativa2E-0812029490 (0)_
Os03g11370.1 7Oryza sativa3E-0611130470 (0)_
Zm00001eb168870_P003 agpv5Zea mays6E-1110032500 (0)M
Zm00001eb168870_P002 agpv5Zea mays1E-1010032500 (0)M
GRMZM2G001048_P02 3.21Zea mays1E-1010032500 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: B3(2) CDC45(1) CSRNP_N(1)
TargetP: Cytoplasm (Class 4 C0.059; M0.096; S0.401; _0.701)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 326 aa (-cTP 306)
Molecular Weight 37.18 kDA(-cTP )
PI 4.39(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help