PPDB

The Plant Proteome Database

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AT5G59960.1   K-stimulated pyrophosphate-energized sodium pump protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G59960.2 11Arabidopsis thaliana030799990 (0)C
AT5G59960.3 11Arabidopsis thaliana02551001000 (0)S
Os01g05830.1 7Oryza sativa3E-17134768820 (0)_
Zm00001eb124290_P001 agpv5Zea mays5E-17234966810 (0)M
GRMZM5G871336_P01 3.21Zea mays5E-17234966810 (0)M
Zm00001eb124290_P002 agpv5Zea mays2E-16534965790 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RNR_N(1)
TargetP: Chloroplast (Class 5 C0.395; M0.248; S0.106; _0.260)
Predotar:
Subcel. Location: Thylakoid membrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 359 aa (-cTP 328) (-lTP 282)
Molecular Weight 41.78 kDA(-cTP 38.23)(-lTP 33.23)
PI 8.22(-cTP 6.27)(-lTP 9.098)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1123Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type
1125Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

14617066(Nuclear proteome)
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help