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The Plant Proteome Database

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AT5G59950.4   RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot. RNA and export factor-binding protein, putative
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G59950.1 11Arabidopsis thaliana3E-13618810010017 (13)C
AT5G59950.5 11Arabidopsis thaliana1E-13518710010016 (12)C
AT5G59950.3 11Arabidopsis thaliana6E-133188989815 (11)_
Os03g17010.1 7Oryza sativa7E-58186587023 (23)_
Os03g17010.3 7Oryza sativa1E-5111969830 (0)_
Os03g17010.2 7Oryza sativa1E-5111969830 (0)_
Zm00001eb012600_P001 agpv5Zea mays2E-6017958720 (0)_
v1_GRMZM2G157329_P01 4a53Zea mays2E-60179587237 (37)_
v1_GRMZM2G157329_P02 4a53Zea mays2E-60179587237 (37)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RRM_1(1) RRM_3(1)
TargetP: Chloroplast (Class 5 C0.749; M0.046; S0.014; _0.674)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 211 aa (-cTP 162)
Molecular Weight 23.58 kDA(-cTP 18.52)
PI 10.45(-cTP 9.92)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
2151Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2241Detail       seedlings [A. thaliana] total tissue gfs9
2242Detail       seedlings [A. thaliana] total tissue gfs9
2254Detail       leaf [A. thaliana] total seedlings gfs9
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2257Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9
2284Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19329564(peroxisomes (leaf))
19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data


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