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The Plant Proteome Database

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AT5G59950.2   RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G59950.1 11Arabidopsis thaliana1E-12617810010017 (13)C
AT5G59950.3 11Arabidopsis thaliana2E-12617810010015 (11)_
AT5G59950.5 11Arabidopsis thaliana7E-125179999916 (12)C
Os12g01010.1 7Oryza sativa2E-4916556710 (0)C
Os03g17010.3 7Oryza sativa5E-4918058700 (0)_
Os03g17010.2 7Oryza sativa5E-4918058700 (0)_
v1_GRMZM2G157329_P03 4a53Zea mays1E-53167607412 (12)M
GRMZM2G157329_P03 3.21Zea mays1E-5316760747 (2)M
Zm00001eb012600_P001 agpv5Zea mays3E-5316760740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: API5(1) FoP_duplication(1) RRM_1(1) RRM_3(1)
TargetP: Cytoplasm (Class 2 C0.085; M0.183; S0.067; _0.891)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 178 aa (-cTP 163)
Molecular Weight 18.89 kDA(-cTP )
PI 9.33(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2151Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2241Detail       seedlings [A. thaliana] total tissue gfs9
2242Detail       seedlings [A. thaliana] total tissue gfs9
2254Detail       leaf [A. thaliana] total seedlings gfs9
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2257Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19329564(peroxisomes (leaf))
19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data


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