PPDB

 The Plant Proteome Database

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AT5G59890.1   actin depolymerizing factor 4
Lab Annot. actin depolymerizing factor 4 (ADF4)
Mapman: 31.1 cell.organisation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G46010.1 11Arabidopsis thaliana5E-96139939726 (18)_
AT5G59890.3 11Arabidopsis thaliana2E-951321001000 (0)_
AT5G59890.2 11Arabidopsis thaliana2E-9513210010013 (11)_
Os05g02250.2 6Oryza sativa5E-77139819316 (16)_
Os04g46910.1 7Oryza sativa3E-7513771900 (0)_
Os02g44470.1 7Oryza sativa6E-7513673917 (7)_
GRMZM2G037140_P01 3.21Zea mays3E-8013977912 (2)_
v1_GRMZM2G037140_P01 4a53Zea mays3E-8013977911 (1)_
Zm00001eb249860_P001 agpv5Zea mays1E-7113770880 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Cofilin_ADF(1)
TargetP: Cytoplasm (Class 3 C0.098; M0.210; S0.169; _0.695)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 139 aa (-cTP 136)
Molecular Weight 16.03 kDA(-cTP )
PI 6.14(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2296Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 16400686(floem_sap B. napa)
19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help