PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G59830.1   DNA-binding protein
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G59830.3 11Arabidopsis thaliana04251001000 (0)_
AT5G59830.2 11Arabidopsis thaliana04251001000 (0)_
AT5G13660.2 11Arabidopsis thaliana4E-6822451680 (0)_
Os06g51450.1 7Oryza sativa2E-2213639560 (0)C
Os03g17050.1 7Oryza sativa7E-2112040580 (0)_
Os06g01170.1 7Oryza sativa3E-1811536620 (0)C
v1_GRMZM2G387485_P01 4a53Zea mays5E-2212240581 (1)_
GRMZM2G387485_P01 3.21Zea mays5E-2212240580 (0)_
Zm00001eb229120_P001 agpv5Zea mays2E-2116932530 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Peptidase_C53(1) TDBD(1)
TargetP: Cytoplasm (Class 1 C0.091; M0.095; S0.024; _0.899)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 425 aa (-cTP 366)
Molecular Weight 47.09 kDA(-cTP )
PI 5.94(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 20813957(SUMO proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help