PPDB

PPDB	The Plant Proteome Database

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AT5G59820.1 C2H2-type zinc finger family protein

Lab Annot.

Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G46080.1 11 Arabidopsis thaliana 2E-65 167 68 75 0 (0) _
AT3G46090.1 11 Arabidopsis thaliana 2E-60 167 64 72 0 (0) _
AT3G46070.1 11 Arabidopsis thaliana 1E-53 173 55 66 0 (0) _
Os03g60540.1 7 Oryza sativa 1E-23 144 38 49 0 (0) _
Os01g62130.1 7 Oryza sativa 2E-23 140 40 48 0 (0) _
Os05g02390.1 7 Oryza sativa 4E-23 122 46 54 0 (0) _
Zm00001eb012700_P001 agpv5 Zea mays 6E-27 154 46 53 0 (0) _
GRMZM2G048154_P01 3.21 Zea mays 6E-27 154 46 53 0 (0) _
v1_GRMZM2G048154_P01 4a53 Zea mays 6E-27 154 46 53 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	OrfB_Zn_ribbon(2) zf-C2H2(2) zf-C2H2_2(2) zf-C2H2_4(2) zf-C2H2_6(2) zf-C2H2_9(2)
TargetP:	Cytoplasm (Class 3 C0.074; M0.046; S0.103; _0.679)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	162 aa (-cTP 69)
Molecular Weight	17.33 kDA(-cTP )
PI	9.62(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19245862(nuclear phosphoproteins (seedlings & cell culture))

Comparative Proteomics Data