PPDB

The Plant Proteome Database

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AT5G59820.1   C2H2-type zinc finger family protein

Lab Annot.
Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G46080.1 11Arabidopsis thaliana2E-6516768750 (0)_
AT3G46090.1 11Arabidopsis thaliana2E-6016764720 (0)_
AT3G46070.1 11Arabidopsis thaliana1E-5317355660 (0)_
Os03g60540.1 7Oryza sativa1E-2314438490 (0)_
Os01g62130.1 7Oryza sativa2E-2314040480 (0)_
Os05g02390.1 7Oryza sativa4E-2312246540 (0)_
Zm00001eb012700_P001 agpv5Zea mays6E-2715446530 (0)_
GRMZM2G048154_P01 3.21Zea mays6E-2715446530 (0)_
v1_GRMZM2G048154_P01 4a53Zea mays6E-2715446530 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: OrfB_Zn_ribbon(2) zf-C2H2(2) zf-C2H2_2(2) zf-C2H2_4(2) zf-C2H2_6(2) zf-C2H2_9(2)
TargetP: Cytoplasm (Class 3 C0.074; M0.046; S0.103; _0.679)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 162 aa (-cTP 69)
Molecular Weight 17.33 kDA(-cTP )
PI 9.62(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19245862(nuclear phosphoproteins (seedlings & cell culture))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help