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AT5G59750.1 monofunctional riboflavin biosynthesis protein RIBA 3

Lab Annot.

riboflavin biosynthesis protein, putativ, GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase))
Mapman: 18.3.1 Co-factor and vitamine metabolism.riboflavin.GTP cyclohydrolase II

Curated Location

plastid stroma (Pubmed: 23198870 18431481 ) (supported by in-house exprements)

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G59750.2 11 Arabidopsis thaliana 0 543 93 93 43 (16) M
AT5G59750.3 11 Arabidopsis thaliana 0 447 98 99 0 (0) M
AT5G64300.1 11 Arabidopsis thaliana 0 434 65 83 144 (54) C
Os05g38570.1 7 Oryza sativa 0 435 75 88 3 (3) M
Os08g37605.1 7 Oryza sativa 0 433 66 83 4 (4) C
Os08g37605.2 7 Oryza sativa 0 433 66 83 4 (4) C
v1_GRMZM2G105466_P01 4a53 Zea mays 0 413 66 84 14 (14) C
GRMZM2G105466_P01 3.21 Zea mays 0 413 66 84 15 (14) C
Zm00001eb244650_P001 agpv5 Zea mays 0 413 66 84 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DHBP_synthase(1) GTP_cyclohydro2(1)
TargetP:	Mitochondria (Class 5 C0.214; M0.241; S0.188; _0.086)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	509 aa (-cTP 466)
Molecular Weight	56.15 kDA(-cTP )
PI	5.70(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
303	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
326	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
339	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
870	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
871	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
873	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
874	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1456	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 2)
1462	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 2)
1486	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 3)
1636	Detail								leaf [A. thaliana]	Stroma stroma	clpt1-2
1941	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1947	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
1949	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
1984	Detail								leaf [A. thaliana]	plastid	wild-type
2112	Detail								leaf [A. thaliana]	Stroma stroma	wt
2113	Detail								leaf [A. thaliana]	Stroma stroma	wt
2114	Detail								leaf [A. thaliana]	Stroma stroma	wt
2115	Detail								leaf [A. thaliana]	Stroma stroma	cGep
2117	Detail								leaf [A. thaliana]	Stroma stroma	cGep

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data