PPDB

 The Plant Proteome Database

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AT5G59600.1   Tetratricopeptide repeat (TPR)-like superfamily protein
Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G33990.2 11Arabidopsis thaliana2E-10653735540 (0)M
AT4G33990.1 11Arabidopsis thaliana3E-10653735540 (0)M
AT4G18750.1 11Arabidopsis thaliana6E-10253034540 (0)C
Os03g16450.1 7Oryza sativa3E-14141850700 (0)M
Os05g49920.1 7Oryza sativa5E-10853437530 (0)C
Os03g27880.1 7Oryza sativa1E-10753433540 (0)M
GRMZM5G836424_P01 3.21Zea mays2E-13044944670 (0)M
Zm00001eb012150_P001 agpv5Zea mays2E-13044944670 (0)M
Zm00001eb213580_P002 agpv5Zea mays9E-10853035550 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: MRP-S27(4) PPR(12) PPR_1(10) PPR_2(10) PPR_3(9) PPR_long(3)
TargetP: Cytoplasm (Class 5 C0.021; M0.164; S0.361; _0.370)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 534 aa (-cTP 510)
Molecular Weight 59.95 kDA(-cTP )
PI 8.55(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help