PPDB

PPDB	The Plant Proteome Database

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AT5G59550.1 zinc finger (C3HC4-type RING finger) family protein

Lab Annot.

zinc finger (C3HC4-type RING finger) protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G59550.2 11 Arabidopsis thaliana 0 407 100 100 0 (0) _
AT3G46620.1 11 Arabidopsis thaliana 1E-167 382 71 81 0 (0) _
AT2G39720.2 11 Arabidopsis thaliana 1E-87 334 45 60 0 (0) _
Os05g01940.1 7 Oryza sativa 7E-94 298 51 65 0 (0) C
Os03g16480.1 7 Oryza sativa 1E-76 329 43 54 0 (0) M
Os01g74040.1 7 Oryza sativa 9E-52 294 36 51 0 (0) _
v1_GRMZM2G567897_P01 4a53 Zea mays 9E-85 357 42 57 0 (0) C
Zm00001eb266970_P001 agpv5 Zea mays 9E-85 357 42 57 0 (0) C
GRMZM2G567897_P01 3.21 Zea mays 9E-85 357 42 57 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1117(1) DUF1272(2) Elf1(2) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1) zf-C3HC4(2)
TargetP:	Cytoplasm (Class 4 C0.150; M0.262; S0.011; _0.513)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	407 aa (-cTP 382)
Molecular Weight	44.38 kDA(-cTP )
PI	6.36(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data