PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G59540.1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Lab Annot.
Mapman: 17.5.1 hormone metabolism.ethylene.synthesis-degradation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G59530.1 11Arabidopsis thaliana036682900 (0)_
AT5G59540.2 11Arabidopsis thaliana0284991000 (0)_
AT1G04350.1 11Arabidopsis thaliana036072834 (3)_
Os03g48430.1 7Oryza sativa4E-11535945632 (2)_
Os04g10350.1 7Oryza sativa3E-10536545640 (0)_
Os08g30210.1 7Oryza sativa3E-9436046590 (0)_
GRMZM2G119116_P01 3.21Zea mays1E-11836147660 (0)_
v1_GRMZM2G119116_P01 4a53Zea mays1E-11836147660 (0)_
GRMZM2G119116_P02 3.21Zea mays1E-11836147660 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 2OG-FeII_Oxy(1) DIOX_N(1)
TargetP: Cytoplasm (Class 2 C0.126; M0.061; S0.100; _0.895)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 366 aa (-cTP 348)
Molecular Weight 41.54 kDA(-cTP )
PI 5.67(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help