PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G59530.1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Lab Annot.
Mapman: 17.5.1 hormone metabolism.ethylene.synthesis-degradation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G59540.1 11Arabidopsis thaliana036682900 (0)_
AT1G04350.1 11Arabidopsis thaliana036173834 (3)_
AT1G04380.1 11Arabidopsis thaliana6E-17936468790 (0)_
Os03g48430.1 7Oryza sativa3E-11236446632 (2)_
Os04g10350.1 7Oryza sativa4E-10836449640 (0)_
Os08g30210.1 7Oryza sativa4E-9536345590 (0)_
GRMZM2G119116_P01 3.21Zea mays6E-11836647630 (0)_
v1_GRMZM2G119116_P01 4a53Zea mays6E-11836647630 (0)_
GRMZM2G119116_P02 3.21Zea mays6E-11836647630 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 2OG-FeII_Oxy(1) DIOX_N(1)
TargetP: Cytoplasm (Class 2 C0.074; M0.168; S0.096; _0.879)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 364 aa (-cTP 347)
Molecular Weight 41.27 kDA(-cTP )
PI 5.18(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help