PPDB

PPDB	The Plant Proteome Database

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AT5G59420.1 OSBP(oxysterol binding protein)-related protein 3C

Lab Annot.

oxysterol-binding protein
Mapman: 31.4 cell.vesicle transport

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G09300.1 11 Arabidopsis thaliana 0 445 80 90 14 (8) C
AT5G02100.1 11 Arabidopsis thaliana 0 455 78 89 5 (4) C
AT5G02100.3 11 Arabidopsis thaliana 0 422 80 91 0 (0) _
Os03g16690.1 7 Oryza sativa 0 442 76 88 19 (19) C
Os03g49770.2 7 Oryza sativa 3E-49 370 34 50 0 (0) _
Os03g49770.1 7 Oryza sativa 4E-47 370 34 50 0 (0) C
Zm00001eb012300_P001 agpv5 Zea mays 0 435 77 90 0 (0) _
v1_GRMZM2G174644_P01 4a53 Zea mays 0 435 77 90 11 (11) _
GRMZM2G174644_P01 3.21 Zea mays 0 435 77 90 12 (12) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Oxysterol_BP(1)
TargetP:	Cytoplasm (Class 5 C0.201; M0.126; S0.292; _0.365)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	457 aa (-cTP 422)
Molecular Weight	51.97 kDA(-cTP )
PI	5.18(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
351	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
352	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
622	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
1541	Detail								leaf [A. thaliana]	Thylakoids plastoglobule	M-48
2005	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2030	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19888209(leaves)
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data