PPDB

PPDB	The Plant Proteome Database

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AT5G59320.1 lipid transfer protein 3

Lab Annot.

lipid transfer protein 3 (LTP3)
Mapman: 11.6 lipid metabolism.lipid transfer proteins etc

Curated Location

TAIR curated location: cell wall10940464

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G59310.1 11 Arabidopsis thaliana 8E-61 115 81 86 16 (13) S
AT3G51590.1 11 Arabidopsis thaliana 4E-37 115 52 67 0 (0) S
AT2G38540.1 11 Arabidopsis thaliana 4E-36 112 55 74 130 (126) S
Os11g02400.1 7 Oryza sativa 2E-27 92 50 73 0 (0) S
Os12g02340.1 7 Oryza sativa 3E-27 92 51 71 0 (0) S
Os11g02424.2 7 Oryza sativa 3E-27 92 51 71 0 (0) S
Zm00001eb163880_P001 agpv5 Zea mays 1E-27 91 53 72 0 (0) S
v1_GRMZM2G107839_P01 4a53 Zea mays 1E-27 91 53 72 21 (20) S
GRMZM2G107839_P02 3.21 Zea mays 1E-27 91 53 72 24 (24) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	LTP_2(1) Tryp_alpha_amyl(1)
TargetP:	Secreted (Class 1 C0.008; M0.014; S0.925; _0.019)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	115 aa (-cTP 56)
Molecular Weight	11.69 kDA(-cTP )
PI	9.04(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
310	Detail								leaf [A. thaliana]	total leaf tissue	clpr2-1:R2-TAPlong
352	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
1410	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	wild-type
1412	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	clpr2-1
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1513	Detail								leaf [A. thaliana]		wild-type
1514	Detail								leaf [A. thaliana]		wild-type
1519	Detail								leaf [A. thaliana]		wild-type
1520	Detail								leaf [A. thaliana]		wild-type
1521	Detail								leaf [A. thaliana]		wild-type
1522	Detail								leaf [A. thaliana]		wild-type
1540	Detail								leaf [A. thaliana]	Thylakoids plastoglobule	wild-type
1541	Detail								leaf [A. thaliana]	Thylakoids plastoglobule	M-48
1542	Detail								leaf [A. thaliana]		wild-type
1611	Detail								leaf [A. thaliana]	chloroplast fractionation thylakoid membrane
1612	Detail								Natural Senescence leaf [A. thaliana]	chloroplast fractionation thylakoid membrane
1651	Detail								leaf [A. thaliana]	plastoglobules plastoglobule	wild-type
2003	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2007	Detail								leaf [A. thaliana]	WT PG plastoglobule	WT
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2029	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2399	Detail								leaf-soluble [A. thaliana]	GFP-nano-trap	wt/DUF760-1GFP/ClpC1WTSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

18538804(apoplast)
18998720(SA-induced secreted proteome (cell culture))
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data