PPDB

 The Plant Proteome Database

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AT5G59320.1   lipid transfer protein 3
Lab Annot. lipid transfer protein 3 (LTP3)
Mapman: 11.6 lipid metabolism.lipid transfer proteins etc
Curated Location
TAIR curated location: cell wall10940464
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G59310.1 11Arabidopsis thaliana8E-61115818616 (14)S
AT3G51590.1 11Arabidopsis thaliana4E-3711552670 (0)S
AT2G38540.1 11Arabidopsis thaliana4E-361125574128 (126)S
Os11g02400.1 7Oryza sativa2E-279250730 (0)S
Os12g02340.1 7Oryza sativa3E-279251710 (0)S
Os11g02424.2 7Oryza sativa3E-279251710 (0)S
Zm00001eb163880_P001 agpv5Zea mays1E-279153720 (0)S
v1_GRMZM2G107839_P01 4a53Zea mays1E-2791537221 (20)S
GRMZM2G107839_P02 3.21Zea mays1E-2791537224 (24)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: LTP_2(1) Tryp_alpha_amyl(1)
TargetP: Secreted (Class 1 C0.008; M0.014; S0.925; _0.019)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 115 aa (-cTP 56)
Molecular Weight 11.69 kDA(-cTP )
PI 9.04(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
310Detail       leaf [A. thaliana] total leaf tissue clpr2-1:R2-TAPlong
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1513Detail       leaf [A. thaliana] wild-type
1514Detail       leaf [A. thaliana] wild-type
1519Detail       leaf [A. thaliana] wild-type
1520Detail       leaf [A. thaliana] wild-type
1521Detail       leaf [A. thaliana] wild-type
1522Detail       leaf [A. thaliana] wild-type
1540Detail       leaf [A. thaliana] Thylakoids plastoglobulewild-type
1541Detail       leaf [A. thaliana] Thylakoids plastoglobuleM-48
1542Detail       leaf [A. thaliana] wild-type
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1651Detail       leaf [A. thaliana] plastoglobules plastoglobulewild-type
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2007Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2029Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2316Detail       leaf [A. thaliana] PG plastoglobule 
2317Detail       leaf [A. thaliana] PG plastoglobule 
2318Detail       leaf [A. thaliana] PG plastoglobule 
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 18538804(apoplast)
18998720(SA-induced secreted proteome (cell culture))
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help