PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G59310.1   lipid transfer protein 4
Lab Annot. LTP4 (LIPID TRANSFER PROTEIN 4); lipid binding
Mapman: 11.6 lipid metabolism.lipid transfer proteins etc
Curated Location plasma membrane
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G59320.1 11Arabidopsis thaliana8E-61115818629 (24)S
AT2G38540.1 11Arabidopsis thaliana4E-371125374130 (126)S
AT3G51590.1 11Arabidopsis thaliana1E-3411552660 (0)S
Os11g02400.1 7Oryza sativa3E-259251710 (0)S
Os12g02330.2 7Oryza sativa7E-259350700 (0)S
Os11g02400.2 7Oryza sativa8E-259052720 (0)S
GRMZM2G101958_P01 3.21Zea mays7E-2492526860 (54)S
v1_GRMZM2G101958_P01 4a53Zea mays7E-2492526882 (81)S
Zm00001eb406100_P001 agpv5Zea mays9E-249252680 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: LTP_2(1) Tryp_alpha_amyl(1)
TargetP: Secreted (Class 1 C0.006; M0.016; S0.976; _0.016)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 112 aa (-cTP 61)
Molecular Weight 11.41 kDA(-cTP )
PI 9.11(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1513Detail       leaf [A. thaliana] wild-type
1521Detail       leaf [A. thaliana] wild-type
1522Detail       leaf [A. thaliana] wild-type
1540Detail       leaf [A. thaliana] Thylakoids plastoglobulewild-type
1541Detail       leaf [A. thaliana] Thylakoids plastoglobuleM-48
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1651Detail       leaf [A. thaliana] plastoglobules plastoglobulewild-type
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2028Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2029Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 21413152(Xylem-sap (BrassicaOleracea))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help