PPDB

 The Plant Proteome Database

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AT5G59290.1   UDP-glucuronic acid decarboxylase 3
Lab Annot. UDP-glucuronic acid decarboxylase (UXS3)
Mapman: 10.1.5 cell wall.precursor synthesis.UXS
Curated Location
TAIR curated location: cytosol15655675,12481102
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G59290.2 11Arabidopsis thaliana034210010068 (35)C
AT3G46440.1 11Arabidopsis thaliana0340959850 (36)C
AT3G46440.2 11Arabidopsis thaliana0340959850 (36)C
Os03g16980.1 7Oryza sativa0322869547 (47)C
Os03g16980.2 7Oryza sativa0322869547 (47)C
Os03g16980.3 7Oryza sativa0292879520 (20)_
v1_GRMZM2G165357_P02 4a53Zea mays0319879466 (66)C
v1_GRMZM2G165357_P01 4a53Zea mays0319879466 (66)C
Zm00001eb397580_P001 agpv5Zea mays031987940 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: 3Beta_HSD(1) Epimerase(1) GDP_Man_Dehyd(1) NAD_binding_4(2) Polysacc_synt_2(2) R
TargetP: Chloroplast (Class 3 C0.792; M0.121; S0.091; _0.275)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 342 aa (-cTP 309)
Molecular Weight 38.57 kDA(-cTP 34.92)
PI 8.23(-cTP 6.45)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1202Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1208Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1876Detail       Total leaf [A. thaliana] total soluble wild-type
1930Detail       leaf [A. thaliana] total leaf tissue Col_0 Wild-type
1932Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2192Detail        [A. thaliana] total soluble P3-trap-strepII 16
2222Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2287Detail        [A. thaliana] Clp C1 WT
2290Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2300Detail        [A. thaliana] Clp C1 TRAP
2303Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 16358359(cell suspension (Gamborg))
15815986(Silique)
19200160(flower-stage 12)
20118269(developing seeds)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data

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