PPDB

PPDB	The Plant Proteome Database

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AT5G59200.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

OTP80 - PPR protein -editing rpl23
Mapman: 27.1.5* RNA.processing.editing

Curated Location

plastid (Pubmed: 23198870 19934379 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G37380.1 11 Arabidopsis thaliana 1E-126 537 36 59 0 (0) C
AT5G66520.1 11 Arabidopsis thaliana 2E-125 506 37 59 4 (4) _
AT5G06540.1 11 Arabidopsis thaliana 4E-123 533 36 60 0 (0) S
Os07g02280.1 7 Oryza sativa 1E-137 500 39 60 0 (0) C
Os05g36350.1 7 Oryza sativa 2E-120 493 37 60 0 (0) C
Os10g26070.1 7 Oryza sativa 3E-113 497 35 59 0 (0) M
Zm00001eb298470_P001 agpv5 Zea mays 2E-134 542 38 58 0 (0) M
Zm00001eb076830_P001 agpv5 Zea mays 8E-120 522 37 56 0 (0) M
GRMZM2G474929_P02 3.21 Zea mays 8E-120 522 37 56 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BTAD(2) DYW_deaminase(1) PPR(10) PPR_1(9) PPR_2(9) PPR_3(6) PPR_long(4) RPN7(3)
TargetP:	Chloroplast (Class 3 C0.778; M0.071; S0.015; _0.226)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	544 aa (-cTP 519)
Molecular Weight	61.36 kDA(-cTP 58.71)
PI	5.93(-cTP 5.86)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data