PPDB

 The Plant Proteome Database

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AT5G59180.1   DNA-directed RNA polymerase II
Lab Annot. DNA-directed RNA polymerase II
Mapman: 27.2 RNA.transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G14660.2 11Arabidopsis thaliana6E-1717930540 (0)_
AT4G14660.3 11Arabidopsis thaliana6E-1717930540 (0)_
AT4G14660.1 11Arabidopsis thaliana6E-1717930541 (1)_
Os05g33240.1 7Oryza sativa3E-11317686951 (1)M
Os05g06490.1 7Oryza sativa3E-1816131581 (1)S
Os05g13770.1 7Oryza sativa3E-1414230560 (0)S
GRMZM2G179346_P01 3.21Zea mays5E-11417688950 (0)M
v1_GRMZM2G179346_P01 4a53Zea mays5E-11417688956 (6)M
Zm00001eb287570_P002 agpv5Zea mays5E-11417688950 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: S1(1) SHS2_Rpb7-N(1)
TargetP: Mitochondria (Class 5 C0.063; M0.600; S0.082; _0.439)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 176 aa (-cTP 153)
Molecular Weight 19.46 kDA(-cTP )
PI 6.89(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help