PPDB

The Plant Proteome Database

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AT5G59140.1   BTB/POZ domain-containing protein

Lab Annot. SKP1 protein
Mapman: 29.5.11.4.3.1 protein.degradation.ubiquitin.E3.SCF.SKP
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os11g48030.1 7Oryza sativa1E-489378890 (0)_
GRMZM2G059282_P02 3.21Zea mays3E-489378873 (3)_
GRMZM2G059282_P01 3.21Zea mays3E-489378873 (3)_
v1_GRMZM2G059282_P01 4a53Zea mays3E-489378873 (3)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BTB(1) Skp1_POZ(1)
TargetP: Cytoplasm (Class 4 C0.116; M0.073; S0.323; _0.651)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 96 aa (-cTP 67)
Molecular Weight 11.05 kDA(-cTP )
PI 4.77(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1351Detail       leaf [A. thaliana] total tissue t1-t2
1496Detail       leaf [A. thaliana] Prep1_Prep2_t1_t2

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help