PPDB

 The Plant Proteome Database

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AT5G59090.1   subtilase 4.12
Lab Annot. subtilase SBT4.12 (target proIDA1)
Mapman: 29.5.5.4.1* protein.degradation.serine protease.SB.S8
Curated Location
TAIR curated location: nucleus & cytoplasm15610358
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G59090.3 11Arabidopsis thaliana073699996 (6)S
AT5G59090.2 11Arabidopsis thaliana073699995 (5)S
AT5G59120.1 11Arabidopsis thaliana072983910 (0)S
Os01g52750.1 7Oryza sativa5E-16477839550 (0)S
Os04g48416.1 7Oryza sativa3E-162773405711 (11)S
Os03g40830.1 7Oryza sativa2E-159751395644 (44)S
GRMZM5G836501_P01 3.21Zea mays072646610 (0)S
Zm00001eb302440_P001 agpv5Zea mays073145610 (0)M
v1_GRMZM2G349462_P01 4a53Zea mays072645600 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: fn3_6(1) Inhibitor_I9(1) PA(1) Peptidase_S8(1)
TargetP: Secreted (Class 1 C0.005; M0.028; S0.978; _0.052)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 736 aa (-cTP 666)
Molecular Weight 78.10 kDA(-cTP )
PI 9.11(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to roots)
WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help