PPDB

PPDB	The Plant Proteome Database

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AT5G59000.1 RING/FYVE/PHD zinc finger superfamily protein

Lab Annot.

RING/FYVE/PHD zinc finger protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G05830.1 11 Arabidopsis thaliana 4E-34 156 41 51 0 (0) _
AT2G37950.1 11 Arabidopsis thaliana 3E-29 156 39 49 0 (0) _
AT5G01070.1 11 Arabidopsis thaliana 5E-26 158 36 48 0 (0) _
Os05g37900.1 7 Oryza sativa 2E-31 159 41 48 0 (0) _
Os01g63150.1 7 Oryza sativa 8E-22 146 41 49 0 (0) _
Os01g53130.2 7 Oryza sativa 2E-17 101 37 55 0 (0) _
Zm00001eb147890_P001 agpv5 Zea mays 5E-35 166 45 52 0 (0) _
GRMZM2G005000_P01 3.21 Zea mays 5E-35 166 45 52 0 (0) _
v1_GRMZM2G005000_P01 4a53 Zea mays 5E-35 166 45 52 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Afi1(1) Astro_capsid_p(1) ATS3(1) Autophagy_act_C(1) bCoV_NSP3_N(1) BUD22(1) Cob
TargetP:	Cytoplasm (Class 5 C0.467; M0.078; S0.115; _0.607)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	231 aa (-cTP 163)
Molecular Weight	25.84 kDA(-cTP )
PI	4.92(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data