PPDB

PPDB	The Plant Proteome Database

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AT5G58787.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G58787.2 11 Arabidopsis thaliana 2E-168 242 93 93 0 (0) _
AT3G47160.1 11 Arabidopsis thaliana 2E-154 245 82 91 0 (0) _
AT5G58787.3 11 Arabidopsis thaliana 2E-151 222 92 92 0 (0) _
Os10g35670.1 7 Oryza sativa 9E-118 241 65 80 0 (0) _
Os07g46700.3 7 Oryza sativa 1E-117 241 64 79 0 (0) _
Os07g46700.2 7 Oryza sativa 8E-113 223 66 80 0 (0) _
Zm00001eb433880_P001 agpv5 Zea mays 4E-125 242 68 80 0 (0) _
GRMZM2G440259_P02 3.21 Zea mays 4E-125 242 68 80 0 (0) _
Zm00001eb433880_P002 agpv5 Zea mays 4E-124 240 68 80 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CDC24_OB3(1) Prok-RING_4(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1
TargetP:	Cytoplasm (Class 2 C0.084; M0.086; S0.191; _0.809)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	242 aa (-cTP 167)
Molecular Weight	28.14 kDA(-cTP )
PI	7.49(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data