PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G58720.2   smr (Small MutS Related) domain-containing protein

Lab Annot. smr (Small MutS Related) domain-containing protein
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G58720.3 11Arabidopsis thaliana04531001000 (0)_
AT5G58720.1 11Arabidopsis thaliana04531001000 (0)_
AT3G15390.1 11Arabidopsis thaliana7E-2043425430 (0)_
Os01g12530.2 7Oryza sativa1E-6445935500 (0)C
Os01g12530.3 7Oryza sativa1E-6445935500 (0)C
Os01g12530.1 7Oryza sativa6E-6444335510 (0)C
Zm00001eb119510_P004 agpv5Zea mays2E-6244436510 (0)C
Zm00001eb119510_P002 agpv5Zea mays8E-6144735510 (0)C
GRMZM2G046355_P03 3.21Zea mays8E-6144735510 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1296(2) DUF1771(1) DUF5774(1) HOIP-UBA(3) UBA(2)
TargetP: Cytoplasm (Class 2 C0.094; M0.213; S0.037; _0.818)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 471 aa (-cTP 457)
Molecular Weight 51.50 kDA(-cTP )
PI 5.68(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help