PPDB

PPDB	The Plant Proteome Database

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AT5G58620.1 zinc finger (CCCH-type) family protein

Lab Annot.

zinc finger (CCCH-type) protein
Mapman: 27.3.12 RNA.regulation of transcription.C3H zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G40140.1 11 Arabidopsis thaliana 8E-172 618 47 61 0 (0) _
AT2G40140.2 11 Arabidopsis thaliana 8E-172 618 47 61 0 (0) _
AT3G55980.1 11 Arabidopsis thaliana 7E-165 612 47 61 0 (0) _
Os03g49170.3 7 Oryza sativa 1E-135 652 43 55 0 (0) _
Os03g49170.1 7 Oryza sativa 2E-135 653 43 55 0 (0) _
Os05g03760.1 7 Oryza sativa 3E-130 606 43 56 0 (0) _
v1_GRMZM2G180979_P01 4a53 Zea mays 9E-141 654 41 54 1 (1) _
GRMZM2G180979_P01 3.21 Zea mays 9E-141 654 41 54 0 (0) _
Zm00001eb053870_P001 agpv5 Zea mays 9E-141 654 41 54 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Ank(2) Ank_2(1) Ank_3(2) Ank_4(2) Ank_5(2) Torus(1) zf-CCCH(3) zf-CCCH_2(3) zf-C
TargetP:	Secreted (Class 5 C0.045; M0.026; S0.575; _0.531)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	607 aa (-cTP 576)
Molecular Weight	66.45 kDA(-cTP )
PI	5.38(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data