PPDB

The Plant Proteome Database

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AT5G58590.1   RAN binding protein 1

Lab Annot. RANBP1 (RAN BINDING PROTEIN 1)
Mapman: 30.5 signalling.G-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G30060.1 11Arabidopsis thaliana2E-105218718344 (20)_
AT1G07140.1 11Arabidopsis thaliana2E-1001817887160 (77)_
Os05g28290.1 7Oryza sativa1E-85180688132 (32)_
Os03g18180.1 7Oryza sativa3E-81188658020 (20)_
Zm00001eb351120_P002 agpv5Zea mays1E-8217068810 (0)_
GRMZM2G111411_P01 3.21Zea mays1E-82170688131 (24)_
v1_GRMZM2G111411_P01 4a53Zea mays1E-82170688117 (17)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ran_BP1(1) WH1(1)
TargetP: Cytoplasm (Class 2 C0.035; M0.171; S0.095; _0.958)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 219 aa (-cTP 187)
Molecular Weight 24.72 kDA(-cTP )
PI 4.71(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1875Detail       Total leaf [A. thaliana] total soluble wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(seedling)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help