PPDB

 The Plant Proteome Database

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AT5G58490.1   NAD(P)-binding Rossmann-fold superfamily protein
Lab Annot. cinnamoyl-CoA reductase family
Mapman: 16.2.1.7 secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G02400.1 11Arabidopsis thaliana7E-11731950727 (4)_
AT1G51410.1 11Arabidopsis thaliana1E-9732648690 (0)_
AT5G19440.1 11Arabidopsis thaliana9E-95322476662 (49)_
Os03g60380.1 7Oryza sativa1E-14732167790 (0)_
Os01g61230.1 7Oryza sativa4E-11831651730 (0)_
Os01g34480.1 7Oryza sativa1E-101320476813 (13)_
Zm00001eb211970_P001 agpv5Zea mays9E-14531963750 (0)_
GRMZM2G107076_P02 3.21Zea mays9E-14531963750 (0)_
v1_GRMZM2G107076_P02 4a53Zea mays2E-14132961720 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: 3Beta_HSD(1) adh_short(3) Epimerase(1) GDP_Man_Dehyd(1) KR(1) NAD_binding_10(1)
TargetP: Cytoplasm (Class 3 C0.020; M0.254; S0.135; _0.730)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 324 aa (-cTP 315)
Molecular Weight 35.76 kDA(-cTP )
PI 5.62(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
311Detail       leaf [A. thaliana] total leaf tissue clpr2-1:R2-his6
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2219Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2249Detail       seedlings [A. thaliana] total tissue gfs9
2262Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type
2263Detail       leaf [A. thaliana] stroma Clp Clp C1 trap
2286Detail        [A. thaliana] Clp C1 WT
2287Detail        [A. thaliana] Clp C1 WT
2300Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 16055689(Glutathionylated suspension cell)
11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
18599647(seed proteome)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data

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