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The Plant Proteome Database

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AT5G58470.1   TBP-associated factor 15B

Lab Annot. RRM and Zn finger Ran domain protein
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G58470.2 11Arabidopsis thaliana04221001002 (2)_
AT1G50300.1 11Arabidopsis thaliana1E-1011043530 (0)_
Os01g07070.2 7Oryza sativa1E-68265576312 (12)_
Os01g07070.4 7Oryza sativa1E-68265576312 (12)_
Os01g07070.3 7Oryza sativa1E-68265576312 (12)_
GRMZM2G097775_P02 3.21Zea mays1E-69281586411 (11)_
GRMZM2G097775_P01 3.21Zea mays1E-69281586411 (11)_
Zm00001eb336220_P001 agpv5Zea mays1E-6928158640 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RRM_1(2) zf-RanBP(1)
TargetP: Cytoplasm (Class 2 C0.083; M0.142; S0.055; _0.936)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 422 aa (-cTP 323)
Molecular Weight 42.32 kDA(-cTP )
PI 8.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
343Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
876Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help