PPDB

PPDB	The Plant Proteome Database

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AT5G58450.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

N-terminal acetyltransferase (NAA25) auxiliary subunit NATB complex
Mapman: 29.12.1* protein.acetylation.acetyltransferase

Curated Location

cytosol (Pubmed: 24244708 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G58450.2 11 Arabidopsis thaliana 0 1002 100 100 0 (0) _
Os05g27870.1 7 Oryza sativa 0 1020 53 70 6 (6) _
Zm00001eb286340_P002 agpv5 Zea mays 0 1008 52 70 0 (0) _
Zm00001eb286340_P001 agpv5 Zea mays 0 863 47 66 0 (0) S
GRMZM2G442057_P01 3.21 Zea mays 5E-107 252 73 81 10 (4) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Alpha-E(2) ANAPC3(3) Fis1_TPR_C(2) NARP1(2) NatB_MDM20(1) PRP9_N(2) Rapsyn_N(1)
TargetP:	Cytoplasm (Class 4 C0.035; M0.403; S0.075; _0.764)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1065 aa (-cTP 1004)
Molecular Weight	121.46 kDA(-cTP )
PI	5.68(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1392	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1395	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1404	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
1545	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
1557	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
2303	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data