PPDB

 The Plant Proteome Database

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AT5G58440.1   sorting nexin 2A
Lab Annot. phox (PX) domain-containing protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G07120.1 11Arabidopsis thaliana058781873 (3)_
AT5G07120.2 11Arabidopsis thaliana058781870 (0)_
AT5G07120.3 11Arabidopsis thaliana056481870 (0)_
Os05g27920.1 7Oryza sativa043565790 (0)_
Os01g61150.1 7Oryza sativa3E-10745144590 (0)M
Os05g39680.1 7Oryza sativa7E-10743548658 (8)_
GRMZM2G141760_P01 3.21Zea mays043762791 (1)_
Zm00001eb286350_P001 agpv5Zea mays043762790 (0)_
v1_GRMZM2G141760_P01 4a53Zea mays043762790 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Arfaptin(1) CENP-H(2) PX(1) Vps5(1)
TargetP: Cytoplasm (Class 2 C0.123; M0.071; S0.046; _0.910)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 587 aa (-cTP 518)
Molecular Weight 65.53 kDA(-cTP )
PI 5.18(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 18463617(suspension cells-phosphorylated proteins)
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

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