PPDB

PPDB	The Plant Proteome Database

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AT5G58440.1 sorting nexin 2A

Lab Annot.

phox (PX) domain-containing protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G07120.1 11 Arabidopsis thaliana 0 587 81 87 3 (3) _
AT5G07120.2 11 Arabidopsis thaliana 0 587 81 87 0 (0) _
AT5G07120.3 11 Arabidopsis thaliana 0 564 81 87 0 (0) _
Os05g27920.1 7 Oryza sativa 0 435 65 79 0 (0) _
Os01g61150.1 7 Oryza sativa 3E-107 451 44 59 0 (0) M
Os05g39680.1 7 Oryza sativa 7E-107 435 48 65 8 (8) _
GRMZM2G141760_P01 3.21 Zea mays 0 437 62 79 31 (1) _
Zm00001eb286350_P001 agpv5 Zea mays 0 437 62 79 0 (0) _
v1_GRMZM2G141760_P01 4a53 Zea mays 0 437 62 79 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Arfaptin(1) CENP-H(2) PX(1) Vps5(1)
TargetP:	Cytoplasm (Class 2 C0.123; M0.071; S0.046; _0.910)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	587 aa (-cTP 518)
Molecular Weight	65.53 kDA(-cTP )
PI	5.18(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data