PPDB

PPDB	The Plant Proteome Database

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AT5G58410.1 HEAT/U-box domain-containing protein

Lab Annot.

protein binding / zinc ion binding
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G58410.2 11 Arabidopsis thaliana 0 1873 99 99 0 (0) C
Os01g74610.1 7 Oryza sativa 0 1983 41 59 2 (2) M
Zm00001eb093280_P001 agpv5 Zea mays 0 1956 39 60 0 (0) M
v1_GRMZM2G123660_P02 4a53 Zea mays 0 1956 39 59 1 (1) M
GRMZM2G123660_P02 3.21 Zea mays 0 1956 39 59 6 (1) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C1_1(1) FANCL_C(1) HEAT(3) Mak10(1) RINGv(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_
TargetP:	Chloroplast (Class 4 C0.651; M0.431; S0.011; _0.028)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1873 aa (-cTP 1826)
Molecular Weight	208.74 kDA(-cTP 204.20)
PI	5.32(-cTP 5.23)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
1828	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Col-0 Fluctuating light
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2286	Detail								[A. thaliana]		Clp C1 WT
2289	Detail								[A. thaliana]		Clp C1 TRAP
2291	Detail								[A. thaliana]		Clp C1 TRAP
2296	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2299	Detail								[A. thaliana]		Clp C1 TRAP
2301	Detail								[A. thaliana]		Clp C1 TRAP
2306	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data