PPDB

PPDB	The Plant Proteome Database

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AT5G58220.2 transthyretin-like protein

Lab Annot.

TTL (TRANSTHYRETIN-LIKE PROTEIN); steroid binding
Mapman: 35.2 not assigned.unknown

Curated Location

peroxisome (Pubmed: 17951448 21472859 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G58220.3 11 Arabidopsis thaliana 0 311 91 91 19 (11) _
AT5G58220.1 11 Arabidopsis thaliana 0 324 88 88 8 (2) _
Os03g27320.2 7 Oryza sativa 2E-90 277 50 67 38 (38) M
Os03g27320.3 7 Oryza sativa 3E-90 272 51 66 38 (38) M
Os03g27320.1 7 Oryza sativa 4E-87 297 47 62 38 (38) M
Zm00001eb392560_P001 agpv5 Zea mays 2E-90 271 52 67 0 (0) C
Zm00001eb392560_P002 agpv5 Zea mays 5E-87 296 48 62 0 (0) C
GRMZM6G548844_P02 3.21 Zea mays 7E-63 198 52 66 11 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	OHCU_decarbox(1) Transthyretin(1)
TargetP:	Cytoplasm (Class 2 C0.162; M0.101; S0.049; _0.850)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	286 aa (-cTP 197)
Molecular Weight	31.51 kDA(-cTP )
PI	5.41(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

17951448(peroxisome (leaves))
18931141(peroxisomes- high&low purity (cell culture))
18931141(peroxisomes-high purity (cell culture))
19888209(leaves)
19376835(leaf phosphoproteins)
19329564(peroxisomes (leaf))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21841088(mitochondria (2DE native gel))
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data