PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G58190.1   evolutionarily conserved C-terminal region 10
Lab Annot. evolutionarily conserved C-terminal region 10 (ECT10)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G58190.2 11Arabidopsis thaliana052899993 (3)C
AT3G13060.2 11Arabidopsis thaliana7E-99550405342 (12)_
AT3G13060.4 11Arabidopsis thaliana7E-9955040530 (0)_
Os08g44200.1 7Oryza sativa7E-10346543570 (0)_
Os08g12760.3 7Oryza sativa2E-9544143572 (2)_
Os08g12760.1 7Oryza sativa2E-9544143572 (2)C
Zm00001eb039740_P003 agpv5Zea mays5E-10445443580 (0)_
Zm00001eb039740_P002 agpv5Zea mays6E-10445443580 (0)_
GRMZM2G025488_P02 3.21Zea mays2E-10344543570 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: YTH(1)
TargetP: Chloroplast (Class 4 C0.620; M0.115; S0.067; _0.274)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 527 aa (-cTP 503)
Molecular Weight 58.34 kDA(-cTP 55.77)
PI 5.55(-cTP 5.47)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2215Detail       leaf [A. thaliana] total leaf tissue Clp P5 trap st
2216Detail       leaf [A. thaliana] total leaf tissue Clp P5 st
2301Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help