PPDB

The Plant Proteome Database

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AT5G58090.1   O-Glycosyl hydrolases family 17 protein

Lab Annot. glycosyl hydrolase family 17 protein
Mapman: 35.1 not assigned.no ontology
Curated Location plasma membrane

TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G31140.1 11Arabidopsis thaliana0445647918 (11)S
AT5G20870.1 11Arabidopsis thaliana8E-17845655710 (0)S
AT5G64790.1 11Arabidopsis thaliana5E-16444452680 (0)S
Os02g04670.1 7Oryza sativa043070830 (0)S
Os08g12800.1 7Oryza sativa046759742 (2)S
Os03g27980.1 7Oryza sativa043754720 (0)S
v1_AC217887.3_FGP004 4a53Zea mays044456740 (0)S
Zm00001eb232030_P001 agpv5Zea mays042770840 (0)S
v1_GRMZM2G097207_P01 4a53Zea mays042770840 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CRM1_C(2) Glyco_hydro_17(1) X8(1)
TargetP: Mitochondria (Class 5 C0.013; M0.623; S0.598; _0.007)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 477 aa (-cTP 459)
Molecular Weight 52.21 kDA(-cTP )
PI 5.59(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1208Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
2005Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

12805588(GBI-anchored-callus)
14517339(GPI anchored suspension cells)
16618929(PlasmaMembrane-LOPIT-callus)
17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19334764(plasma membrane (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
20843791(DRM-enriched plasmamembrane)
21173025(root proteome)
21988472(vacuole (unfiltered data))
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


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