PPDB

The Plant Proteome Database

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AT5G58030.1   Transport protein particle (TRAPP) component

Lab Annot. Transport protein particle (TRAPP) component
Mapman: 34.99 transport.misc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os01g51220.1 7Oryza sativa3E-13419392986 (6)M
GRMZM2G439457_P02 3.21Zea mays6E-135193939723 (8)M
Zm00001eb271220_P001 agpv5Zea mays6E-13519393970 (0)M
GRMZM2G439457_P01 3.21Zea mays5E-8613190985 (4)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: TRAPP(1)
TargetP: Cytoplasm (Class 3 C0.037; M0.233; S0.257; _0.686)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 195 aa (-cTP 177)
Molecular Weight 21.87 kDA(-cTP )
PI 7.75(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
21826108(SYP trans-Golgi-filtered)
21173025(root proteome)

Comparative Proteomics Data


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