PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G58010.1   LJRHL1-like 3

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
TAIR curated location: nucleus16581911
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G24260.1 11Arabidopsis thaliana5E-7522560710 (0)_
AT2G24260.2 11Arabidopsis thaliana5E-7516971810 (0)C
AT4G30980.1 11Arabidopsis thaliana2E-7219965710 (0)C
Os09g25040.1 7Oryza sativa2E-6217565740 (0)_
Os03g58330.1 7Oryza sativa1E-6020254660 (0)_
Os02g55250.1 7Oryza sativa8E-5816364730 (0)_
v1_GRMZM2G350165_P01 4a53Zea mays1E-6816270800 (0)_
GRMZM2G350165_P01 3.21Zea mays1E-6816270800 (0)_
Zm00001eb099470_P003 agpv5Zea mays1E-6816270800 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(1)
TargetP: Cytoplasm (Class 2 C0.203; M0.082; S0.003; _0.900)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 297 aa (-cTP 247)
Molecular Weight 31.47 kDA(-cTP )
PI 5.79(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help