PPDB

The Plant Proteome Database

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AT5G57990.1   ubiquitin-specific protease 23

Lab Annot. ubiquitin-specific protease 23 (UBP23)
Mapman: 29.5.11.5 protein.degradation.ubiquitin.ubiquitin protease
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G24640.2 11Arabidopsis thaliana7E-6631139590 (0)S
AT4G31670.1 11Arabidopsis thaliana3E-6431137590 (0)S
AT2G24640.1 11Arabidopsis thaliana7E-6431138590 (0)S
Os06g08530.2 7Oryza sativa3E-16339660730 (0)C
Os06g08530.1 7Oryza sativa3E-16339660730 (0)C
Os02g55180.2 7Oryza sativa5E-14638256690 (0)_
Zm00001eb374670_P001 agpv5Zea mays1E-15851450650 (0)_
GRMZM2G016323_P01 3.21Zea mays2E-15851450650 (0)_
v1_GRMZM2G016323_P01 4a53Zea mays2E-15851450654 (4)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CpXC(1) UCH(1) UCH_1(1)
TargetP: Chloroplast (Class 4 C0.838; M0.030; S0.012; _0.448)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 859 aa (-cTP 784)
Molecular Weight 94.90 kDA(-cTP 86.80)
PI 9.31(-cTP 9.33)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help