PPDB

The Plant Proteome Database

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AT5G57980.1   RNA polymerase II fifth largest subunit%2C C

Lab Annot.
Mapman: 27.2 RNA.transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G22320.1 11Arabidopsis thaliana1E-5520643678 (4)_
AT2G41340.1 11Arabidopsis thaliana2E-2720132550 (0)_
AT3G57080.1 11Arabidopsis thaliana1E-2518832550 (0)_
Os04g41040.1 7Oryza sativa1E-6320649713 (3)M
Os01g59140.1 7Oryza sativa5E-5720345690 (0)_
Os04g41040.2 7Oryza sativa2E-4216645692 (2)M
Zm00001eb079110_P002 agpv5Zea mays7E-6421048700 (0)_
v1_GRMZM2G099183_P02 4a53Zea mays7E-64210487016 (16)_
GRMZM2G099183_P02 3.21Zea mays7E-64210487011 (11)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_3(2) RNA_pol_Rpb5_C(1) RNA_pol_Rpb5_N(2)
TargetP: Cytoplasm (Class 2 C0.085; M0.135; S0.093; _0.850)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 210 aa (-cTP 192)
Molecular Weight 24.34 kDA(-cTP )
PI 9.40(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help