PPDB

PPDB	The Plant Proteome Database

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AT5G57940.1 cyclic nucleotide gated channel 5

Lab Annot.

Mapman: 34.22 transport.cyclic nucleotide or calcium regulated channels

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G57940.2 11 Arabidopsis thaliana 0 717 100 100 0 (0) _
AT5G57940.3 11 Arabidopsis thaliana 0 717 99 99 0 (0) C
AT2G23980.10 11 Arabidopsis thaliana 0 731 76 85 0 (0) _
Os03g44440.1 7 Oryza sativa 0 669 63 77 0 (0) _
Os04g55080.1 7 Oryza sativa 0 721 61 74 0 (0) C
Os12g28260.1 7 Oryza sativa 0 723 59 74 0 (0) _
Zm00001eb068710_P002 agpv5 Zea mays 0 722 61 74 0 (0) _
Zm00001eb068710_P005 agpv5 Zea mays 0 722 61 74 0 (0) _
Zm00001eb068710_P003 agpv5 Zea mays 0 722 61 74 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	cNMP_binding(1) Ion_trans(1) IQ(1)
TargetP:	Cytoplasm (Class 4 C0.217; M0.152; S0.049; _0.561)
Predotar:
Subcel. Location:
TM-HMM prediction:	3 TMs
Aramemnon:	4 TMs
TAT position:
Length	717 aa (-cTP 635)
Molecular Weight	81.97 kDA(-cTP )
PI	9.18(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17432890(leaf total membranes)

Comparative Proteomics Data