PPDB

The Plant Proteome Database

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AT5G57900.1   SKP1 interacting partner 1

Lab Annot. SKP1 interacting partner 1
Mapman: 29.5.11.4.3.1 protein.degradation.ubiquitin.E3.SCF.SKP
Curated Location
TAIR curated location: SCF ubiquitin ligase complex11387208
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G30640.1 11Arabidopsis thaliana3E-10127953710 (0)_
AT4G05497.1 11Arabidopsis thaliana9E-2724231490 (0)C
AT4G05470.1 11Arabidopsis thaliana8E-2627030490 (0)_
Os08g16840.1 7Oryza sativa6E-9929849660 (0)_
Os04g37590.1 7Oryza sativa9E-2323432470 (0)M
Os06g11630.1 7Oryza sativa3E-1825327460 (0)_
Zm00001eb177870_P001 agpv5Zea mays7E-9130446630 (0)_
Zm00001eb177870_P002 agpv5Zea mays2E-5117349640 (0)_
GRMZM2G059643_P01 3.21Zea mays5E-2111241610 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box-like(1) LRR_1(3) LRR_4(4) LRR_6(4) LRR_8(2)
TargetP: Cytoplasm (Class 2 C0.073; M0.120; S0.134; _0.871)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 300 aa (-cTP 276)
Molecular Weight 34.57 kDA(-cTP )
PI 5.60(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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