PPDB

PPDB	The Plant Proteome Database

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AT5G57860.1 Ubiquitin-like superfamily protein

Lab Annot.

ubiquitin protein
Mapman: 29.5.11.1 protein.degradation.ubiquitin.ubiquitin

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G57860.3 11 Arabidopsis thaliana 1E-64 95 100 100 14 (6) _
AT5G57860.2 11 Arabidopsis thaliana 1E-64 95 100 100 14 (6) _
AT5G57860.4 11 Arabidopsis thaliana 2E-41 66 96 98 10 (4) M
Os03g24920.1 7 Oryza sativa 4E-35 77 74 88 7 (7) M
GRMZM2G055527_P01 3.21 Zea mays 4E-41 90 67 86 15 (15) M
Zm00001eb329210_P001 agpv5 Zea mays 4E-41 90 67 86 0 (0) M
v1_GRMZM2G055527_P01 4a53 Zea mays 4E-41 90 67 86 14 (14) M

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2407(1) Rad60-SLD(2) ubiquitin(1) Ubiquitin_2(1) Ubiquitin_5(1)
TargetP:	Cytoplasm (Class 5 C0.024; M0.558; S0.073; _0.607)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	95 aa (-cTP 71)
Molecular Weight	10.90 kDA(-cTP )
PI	4.53(-cTP )

Experimental Evidence

Expand

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data