PPDB

The Plant Proteome Database

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AT5G57780.1   transcription factor

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G30410.1 11Arabidopsis thaliana8E-2517436580 (0)_
AT4G30410.2 11Arabidopsis thaliana8E-2517436580 (0)_
AT2G43060.1 11Arabidopsis thaliana9E-0615929510 (0)_
Os06g44320.1 7Oryza sativa1E-2015934530 (0)_
Os02g08220.1 7Oryza sativa8E-1613534580 (0)C
Os01g43950.1 7Oryza sativa1E-0713030500 (0)_
Zm00001eb412560_P002 agpv5Zea mays1E-1318930470 (0)M
Zm00001eb412560_P001 agpv5Zea mays1E-1318930470 (0)M
GRMZM2G145909_P02 3.21Zea mays1E-1318930470 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_33(1) OPA3(1) PAC4(1)
TargetP: Cytoplasm (Class 2 C0.053; M0.029; S0.032; _0.695)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 167 aa (-cTP 119)
Molecular Weight 19.44 kDA(-cTP )
PI 10.84(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17272265(ubiquinated proteins (suspension cells))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help