PPDB

The Plant Proteome Database

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AT5G57770.1   auxin canalization protein (DUF828)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G57770.2 11Arabidopsis thaliana0330991000 (0)_
AT3G22810.3 11Arabidopsis thaliana3E-2333431490 (0)C
AT3G22810.1 11Arabidopsis thaliana3E-2230132510 (0)_
Os04g42040.1 7Oryza sativa5E-1919443580 (0)_
Os10g41870.1 7Oryza sativa3E-1325934510 (0)M
Os10g41060.1 7Oryza sativa8E-1226831540 (0)_
Zm00001eb425800_P001 agpv5Zea mays1E-5539343610 (0)_
Zm00001eb078470_P002 agpv5Zea mays2E-5040143590 (0)_
AC233888.1_FGP001 3.21Zea mays1E-4842340560 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Auxin_canalis(1) DUF3759(1) PH_2(1)
TargetP: Cytoplasm (Class 3 C0.367; M0.057; S0.084; _0.816)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 406 aa (-cTP 389)
Molecular Weight 44.87 kDA(-cTP )
PI 8.41(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help